Icosahedral packing of RNA viral genomes.
نویسندگان
چکیده
Many spherelike RNA viruses package a portion of their genome in a manner that mirrors the icosahedral symmetry of the protein container, or capsid. Graph-theoretical constraints forbid exact realization of icosahedral symmetry. This paper explores the consequences of graph-theoretical constraints on quasi-icosahedral genome structures. A key result is the prediction that the genome organization is a Hamiltonian path or cycle and that the associated assembly scenario of such single-stranded spherelike RNA viruses resembles that of cylindrical RNA viruses, such as tobacco mosaic viruses.
منابع مشابه
Symmetry-mismatch reconstruction of genomes and associated proteins within icosahedral viruses using cryo-EM
Although near-atomic resolutions have been routinely achieved for structural determination of many icosahedral viral capsids, structures of genomes and associated proteins within the capsids are still less characterized because the genome information is overlapped by the highly symmetric capsid information in the virus particle images. We recently developed a software package for symmetry-misma...
متن کاملVirus structures: Those magnificent molecular machines
Double-stranded RNA viruses face two major problems: the endogenous machinery of its host cells does not replicate RNA genomes, and double-stranded RNA provokes strong cellular defence responses such as interferon induction and gene silencing. The solution for the virus is to keep the genomic double-stranded RNA always in a separate container, an icosahedral viral capsid, and to more-or-less au...
متن کاملBreaking the symmetry of a viral capsid.
The small size, and thus coding capacity, of viral genomes necessitates the repetitive use of identical building blocks in constructing the viral capsid. This genetic economy gives rise to highly symmetric structures, typically with either helical or icosahedral geometries. Assembly of symmetric viral capsids is believed to proceed via “conformational switching” of individual protein subunits (...
متن کاملAsymmetric Genome Organization in an RNA Virus Revealed via Graph-Theoretical Analysis of Tomographic Data
Cryo-electron microscopy permits 3-D structures of viral pathogens to be determined in remarkable detail. In particular, the protein containers encapsulating viral genomes have been determined to high resolution using symmetry averaging techniques that exploit the icosahedral architecture seen in many viruses. By contrast, structure determination of asymmetric components remains a challenge, an...
متن کاملRecombination between defective tombusvirus RNAs generates functional hybrid genomes.
The tombusviruses represent a group of small icosahedral plant viruses that contain monopartite positive-sense RNA genomes. Tombusviruses are able to generate small replicating deletion mutants of their genomes (i.e., defective interfering RNAs) during infections via RNA recombination and/or rearrangement. To further study the process of RNA recombination and to determine whether tombusviruses ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Physical review letters
دوره 94 3 شماره
صفحات -
تاریخ انتشار 2005